Research library: browse by date
From 2006-2011, the Consortium for Functional Glycomics (CFG) and the Nature Publishing Group (NPG) collaborated to provide the Functional Glycomics Update, a one-stop resource with monthly updates on the latest developments in glycobiology. This library is a collection of the most significant research advances and key review articles in glycobiology from across the literature, spanning dates from 2006-2011.
-
February 2007
-
Emerging glycomics technologies
Jeremy E Turnbull and Robert A Field
Original research paper: Nature Chemical Biology 3
doi:10.1038/nchembio0207-74 -
Glypican LON-2 Is a Conserved Negative Regulator of BMP-like Signaling in Caenorhabditis elegans
T Gumienny et al.
Original research paper: Current Biology 17
doi:10.1016/j.cub.2006.11.065 -
Structure of the putative mutarotase YeaD from : structural comparison with galactose mutarotases
Sagar Chittori, Dhirendra K. Simanshu, H. S. Savithri and M. R. N. Murthy
Original research paper: Acta Crystallographica Section D Biological Crystallography 63
doi:10.1107/S090744490604618X -
Altered Expression of Galectin-3 Induces Cortical Thymocyte Depletion and Premature Exit of Immature Thymocytes during Trypanosoma cruzi Infection
E. Silva-monteiro et al.
Original research paper: American Journal Of Pathology 170
doi:10.2353/ajpath.2007.060389 -
Development of Immunoglobulin A Nephropathy- Like Disease in β-1,4-Galactosyltransferase-I-Deficient Mice
T. Nishie et al.
Original research paper: American Journal Of Pathology 170
doi:10.2353/ajpath.2007.060559 -
Analysis of variable N-glycosylation site occupancy in glycoproteins by liquid chromatography electrospray ionization mass spectrometry
J Nettleship et al.
Original research paper: Analytical Biochemistry 361
doi:10.1016/j.ab.2006.11.005 -
An alternative infrared spectroscopy assay for the quantification of polysaccharides in bacterial samples
L Marcotte et al.
Original research paper: Analytical Biochemistry 361
doi:10.1016/j.ab.2006.11.009 -
Anticoagulant heparan sulfate: structural specificity and biosynthesis
Jian Liu and Lars C. Pedersen
Original research paper: Applied Microbiology and Biotechnology 74
doi:10.1007/s00253-006-0722-x -
A mannose-specific tetrameric lectin with mitogenic and antibacterial activities from the ovary of a teleost, the cobia (Rachycentron canadum)
Patrick H. K. Ngai and T. B. Ng
Original research paper: Applied Microbiology and Biotechnology 74
doi:10.1007/s00253-006-0649-2 -
Interaction of Arginine-Rich Peptides with Membrane-Associated
Proteoglycans Is Crucial for Induction of Actin Organization and
Macropinocytosis.
I. Nakase et al.
Original research paper: Biochemistry 46
doi:10.1021/bi0612824 -
A lectin with antifungal and mitogenic activities from red cluster pepper (Capsicum frutescens) seeds
Patrick H. K. Ngai and T. B. Ng
Original research paper: Applied Microbiology and Biotechnology 74
doi:10.1007/s00253-006-0685-y -
Biochemical and kinetic analysis of the GH3 family β-xylosidase from Aspergillus awamori X-100
E Eneyskaya et al.
Original research paper: Archives of Biochemistry and Biophysics 457
doi:10.1016/j.abb.2006.10.024 -
Purification and characterization of a lectin from endophytic fungus Fusarium solani having complex sugar specificity
F Khan, A Ahmad and M Khan
Original research paper: Archives of Biochemistry and Biophysics 457
doi:10.1016/j.abb.2006.10.019 -
Transient and stable expression of the HCV envelope glycoproteins in cell lines and primary hepatocytes transduced with a recombinant baculovirus
J. C. Martyn et al.
Original research paper: Archives of Virology 152
doi:10.1007/s00705-006-0845-5 -
Evaluation of laser microdissection as a tool in cancer glycomic studies
H Korekane et al.
Original research paper: Biochemical and Biophysical Research Communications 352
doi:10.1016/j.bbrc.2006.10.191 -
Mutagenesis and mechanistic study of a glycoside hydrolase family α-L-arabinofuranosidase from Trichoderma koningii
Chin-Feng Wan et al.
Original research paper: Biochemical Journal 401
doi:10.1042/BJ20060717 -
Directed Evolution of the α-L-Fucosidase from Thermotoga maritima into an α-L-Transfucosidase
G. Osanjo et al.
Original research paper: Biochemistry 46
doi:10.1021/bi061444w -
Analysis of plasma proteins that bind to glycosaminoglycans
A Saito and H Munakata
Original research paper: Biochimica et Biophysica Acta (BBA) - General Subjects 1770
doi:10.1016/j.bbagen.2006.10.015 -
Engineering the sialic acid in organs of mice using N-propanoylmannosamine
D Gagiannis et al.
Original research paper: Biochimica et Biophysica Acta (BBA) - General Subjects 1770
doi:10.1016/j.bbagen.2006.09.023 -
Diversity in the degree of sulfation and chain length of the glycosaminoglycan moiety of urinary trypsin inhibitor isomers
I Kakizaki et al.
Original research paper: Biochimica et Biophysica Acta (BBA) - General Subjects 1770
doi:10.1016/j.bbagen.2006.09.026 -
Immobilized α2,6-linked sialic acid suppresses caspase-3 activation during anti-IgM antibody-induced apoptosis in Ramos cells
Y Azuma, K Higurashi and K Matsumoto
Original research paper: Biochimica et Biophysica Acta (BBA) - General Subjects 1770
doi:10.1016/j.bbagen.2006.10.010 -
The action of TNFα and TGFβ include specific alterations of the glycosylation of bovine and human chondrocytes
X Yang et al.
Original research paper: Biochimica et Biophysica Acta (BBA) - Molecular Cell Research 1773
doi:10.1016/j.bbamcr.2006.09.022 -
Effects of sulfated hyaluronan on keratinocyte differentiation and Wnt and Notch gene expression
T Nagira, M Nagahataishiguro and T Tsuchiya
Original research paper: Biomaterials 28
doi:10.1016/j.biomaterials.2006.09.041 -
Chemoenzymatic synthesis of artificial glycopolypeptides containing multivalent sialyloligosaccharides with a γ-polyglutamic acid backbone and their effect on inhibition of infection by influenza viruses
M Ogata et al.
Original research paper: Bioorganic & Medicinal Chemistry 15
doi:10.1016/j.bmc.2006.11.006 -
Discovery of galectin ligands in fully randomized combinatorial one-bead-one-compound (glyco)peptide libraries
S Andre et al.
Original research paper: Bioorganic & Medicinal Chemistry Letters 17
doi:10.1016/j.bmcl.2006.10.067 -
Thiosialoside clusters using carbosilane dendrimer core scaffolds as a new class of influenza neuraminidase inhibitors
J Sakamoto et al.
Original research paper: Bioorganic & Medicinal Chemistry Letters 17
doi:10.1016/j.bmcl.2006.10.085 -
Glycoprotein Ibα forms disulfide bonds with 2 glycoprotein Ibβ subunits in the resting platelet
S.-Z. Luo et al.
Original research paper: Blood 109
doi:10.1182/blood-2006-05-024091 -
Osteoclast inhibitory lectin (OCIL) inhibits osteoblast differentiation and function in vitro
A Nakamura et al.
Original research paper: Bone 40
doi:10.1016/j.bone.2006.09.001 -
Bilberry xyloglucan—novel building blocks containing β-xylose within a complex structure
H Hilz et al.
Original research paper: Carbohydrate Research 342
doi:10.1016/j.carres.2006.12.005 -
Structural determination of the O-antigenic polysaccharide from Escherichia coli O166
T Ali, A Weintraub and G Widmalm
Original research paper: Carbohydrate Research 342
doi:10.1016/j.carres.2006.11.023 -
The fate of β-D-mannopyranose after its formation by endoplasmic reticulum α-(1
2)-mannosidase
I catalysisC Mulakala, W Nerinckx and P Reilly
Original research paper: Carbohydrate Research 342
doi:10.1016/j.carres.2006.11.012 -
Electrophoretic separation and characterization of urinary glycosaminoglycans and their roles in urolithiasis
M Gohel, D Shum and P Tam
Original research paper: Carbohydrate Research 342
doi:10.1016/j.carres.2006.11.001 -
Ritter-based glycoconjugation of amino acids and peptides—access to novel glycoconjugates displaying a β-amide linkage between amino acid and sugar moiety
M Penner and F Schweizer
Original research paper: Carbohydrate Research 342
doi:10.1016/j.carres.2006.11.006 -
Transferrin and Apolipoprotein C-III Isofocusing Are Complementary in the Diagnosis of N- and O-Glycan Biosynthesis Defects
S. Wopereis et al.
Original research paper: Clinical Chemistry 53
doi:10.1373/clinchem.2006.073940 -
Improved method for analysis of glycosaminoglycans in glycosaminoglycan/protein mixtures: Application in Cohn–Oncley fractions of human plasma
F Cecchi et al.
Original research paper: Clinica Chimica Acta 376
doi:10.1016/j.cca.2006.08.011 -
Quantitative analysis of the expression of glycosylphosphatidylinositol-anchored proteins during the maturation of different hematopoietic cell compartments of normal bone marrow
Pilar María Hernández-campo et al.
Original research paper: Cytometry Part B: Clinical Cytometry 72B
doi:10.1002/cyto.b.20143 -
Combinatorial expression patterns of heparan sulfate sulfotransferases in zebrafish: III. 2-O-sulfotransferase and C5-epimerases
Adam B. Cadwallader and H. Joseph Yost
Original research paper: Developmental Dynamics 236
doi:10.1002/dvdy.21051 -
Heparan sulfate Ndst1 gene function variably regulates multiple signaling pathways during mouse development
Srinivas R. Pallerla et al.
Original research paper: Developmental Dynamics 236
doi:10.1002/dvdy.21038 -
The glycosyltransferase Fringe promotes Delta-Notch signaling between neurons and glia, and is required for subtype-specific glial gene expression
G. B. Thomas and D. J. Van meyel
Original research paper: Development 134
doi:10.1242/dev.02754 -
Influence of N-glycan processing disruption on tyrosinase and melanin synthesis in HM3KO melanoma cells
Hyunjung Choi et al.
Original research paper: Experimental Dermatology 16
doi:10.1111/j.1600-0625.2006.00515.x -
Functional glycosylation of human podoplanin: Glycan structure of platelet aggregation-inducing factor
M Kaneko et al.
Original research paper: FEBS Letters 581
doi:10.1016/j.febslet.2006.12.044 -
Syntenic arrangements of the surface polysaccharide biosynthesis genes in Rhizobium leguminosarum
J Krol, A Mazur, M Marczak and A Skorupska
Original research paper: Genomics 89
doi:10.1016/j.ygeno.2006.08.015 -
New insights in Rapana venosa hemocyanin N-glycosylation resulting from on-line mass spectrometric analyses
K. Sandra, P. Dolashka-angelova, B. Devreese and J. Van beeumen
Original research paper: Glycobiology 17
doi:10.1093/glycob/cwl063 -
Activity-structure correlations in divergent lectin evolution: fine specificity of chicken galectin CG-14 and computational analysis of flexible ligand docking for CG-14 and the closely related CG-16
A. M. Wu et al.
Original research paper: Glycobiology 17
doi:10.1093/glycob/cwl062 -
P-selectin mediates metastatic progression through binding to sulfatides on tumor cells
J. Garcia, N. Callewaert and L. Borsig
Original research paper: Glycobiology 17
doi:10.1093/glycob/cwl059 -
GM1 gangliosidosis: molecular analysis of nine patients and development of an RT-PCR assay for GLB1 gene expression profiling
Anna Caciotti et al.
Original research paper: Human Mutation 28
doi:10.1002/humu.9475 -
Establishment of Mass Spectrometric Fingerprints of Novel Synthetic Cholesteryl Neoglycolipids: The Presence of a Unique C-Glycoside Species During Electrospray Ionization and During Collision-Induced Dissociation Tandem Mass Spectrometry
A Elaneed et al.
Original research paper: Journal of the American Society for Mass Spectrometry 18
doi:10.1016/j.jasms.2006.09.026 -
Structural Characterization of a Specific Glycopeptidolipid Containing a Novel N-Acyl-Deoxy Sugar from Mycobacterium intracellulare Serotype 7 and Genetic Analysis of Its Glycosylation Pathway
N. Fujiwara et al.
Original research paper: Journal of Bacteriology 189
doi:10.1128/JB.01471-06 -
Group B Streptococcal Capsular Sialic Acids Interact with Siglecs (Immunoglobulin-Like Lectins) on Human Leukocytes
A. F. Carlin, A. L. Lewis, A. Varki and V. Nizet
Original research paper: Journal of Bacteriology 189
doi:10.1128/JB.01155-06 -
Resistance to Bacillus thuringiensis Toxin in Caenorhabditis elegans from Loss of Fucose
B. D. Barrows et al.
Original research paper: Journal of Biological Chemistry 282
doi:10.1074/jbc.M606621200 -
Expression, Processing, and Glycosaminoglycan Binding Activity of the Recombinant Human 315-kDa Hyaluronic Acid Receptor for Endocytosis (HARE)
E. N. Harris, S. V. Kyosseva, J. A. Weigel and P. H. Weigel
Original research paper: Journal of Biological Chemistry 282
doi:10.1074/jbc.M607787200 -
Cellular Adhesion Responses to the Heparin-binding (HepII) Domain of Fibronectin Require Heparan Sulfate with Specific Properties
Y. Mahalingam, J. T. Gallagher and J. R. Couchman
Original research paper: Journal of Biological Chemistry 282
doi:10.1074/jbc.M604938200 -
A Ganglioside-induced Toxic Soluble Aβ Assembly: ITS ENHANCED FORMATION FROM AbetaBEARING THE ARCTIC MUTATION
N. Yamamoto et al.
Original research paper: Journal of Biological Chemistry 282
doi:10.1074/jbc.M606202200 -
In Vivo and in Vitro Degradation of Heparan Sulfate (HS) Proteoglycans by HPR1 in Pancreatic Adenocarcinomas: LOSS OF CELL SURFACE HS SUPPRESSES FIBROBLAST GROWTH FACTOR 2-MEDIATED CELL SIGNALING AND PROLIFERATION
X. Xu et al.
Original research paper: Journal of Biological Chemistry 282
doi:10.1074/jbc.M604218200 -
Respiratory Distress and Neonatal Lethality in Mice Lacking Golgi α1,2-Mannosidase IB Involved in N-Glycan Maturation
L. O. Tremblay et al.
Original research paper: Journal of Biological Chemistry 282
doi:10.1074/jbc.M608661200 -
The Hemolymph of the Ascidian Styela plicata (Chordata-Tunicata) Contains Heparin inside Basophil-like Cells and a Unique Sulfated Galactoglucan in the Plasma
C. M. De barros et al.
Original research paper: Journal of Biological Chemistry 282
doi:10.1074/jbc.M604056200 -
Induction and characterization of an unusual α-D-galactosidase from Talaromyces flavus
P Simerska et al.
Original research paper: Journal of Biotechnology 128
doi:10.1016/j.jbiotec.2006.09.006 -
Hyperostosis–Hyperphosphatemia Syndrome: A Congenital Disorder of -Glycosylation Associated With Augmented Processing of Fibroblast Growth Factor 23
Yaacov Frishberg et al.
Original research paper: Journal of Bone and Mineral Research 22
doi:10.1359/jbmr.061105 -
N-glycosylation of theXenopus laevis ClC-5 protein plays a role in cell surface expression, affecting transport activity at the plasma membrane
Sandra Schmieder, Stéphanie Bogliolo and Jordi Ehrenfeld
Original research paper: Journal of Cellular Physiology 210
doi:10.1002/jcp.20882 -
Fast data preprocessing for chromatographic fingerprints of tomato cell wall polysaccharides using chemometric methods
B Quemener et al.
Original research paper: Journal of Chromatography A 1141
doi:10.1016/j.chroma.2006.11.069 -
Dendritic cell immunoreceptors: C-type lectin receptors for pattern-recognition and signaling on antigen-presenting cells
N Kanazawa
Original research paper: Journal of Dermatological Science 45
doi:10.1016/j.jdermsci.2006.09.001 -
Contributions of the lymphocytic choriomeningitis virus glycoprotein and polymerase to strain-specific differences in murine liver pathogenicity
A. Bergthaler et al.
Original research paper: Journal of General Virology 88
doi:10.1099/vir.0.82428-0 -
Cross-genotype characterization of genetic diversity and molecular adaptation in hepatitis C virus envelope glycoprotein genes
R. J. P. Brown et al.
Original research paper: Journal of General Virology 88
doi:10.1099/vir.0.82357-0 -
Absence of N-linked glycans from the F2 subunit of the major baculovirus envelope fusion protein F enhances fusogenicity
G. Long, X. Pan and J. M. Vlak
Original research paper: Journal of General Virology 88
doi:10.1099/vir.0.82418-0 -
Borderline mental development in a congenital disorder of glycosylation (CDG) type Ia patient with multisystemic involvement (intermediate phenotype)
R. Barone et al.
Original research paper: Journal of Inherited Metabolic Disease 30
doi:10.1007/s10545-006-0486-6 -
Crystallographic and in Silico Analysis of the Sialoside-binding Characteristics of the Siglec Sialoadhesin
N Zaccai et al.
Original research paper: Journal of Molecular Biology 365
doi:10.1016/j.jmb.2006.10.084 -
Proteomic Investigation of Glioblastoma Cell Lines Treated with Wild-Type p53 and Cytotoxic Chemotherapy Demonstrates an Association between Galectin-1 and p53 Expression
M. Puchades et al.
Original research paper: Journal of Proteome Research 6
doi:10.1021/pr060302l -
Platelet adhesion to dimeric β2 -glycoprotein I under conditions of flow is mediated by at least two receptors: glycoprotein Ib? and apolipoprotein E receptor 2'
M. T. T. Pennings et al.
Original research paper: Journal of Thrombosis and Haemostasis 5
doi:10.1111/j.1538-7836.2007.02310.x -
Influences of Glycosylation on Antigenicity, Immunogenicity, and Protective Efficacy of Ebola Virus GP DNA Vaccines
W. Dowling et al.
Original research paper: Journal of Virology 81
doi:10.1128/JVI.02098-06 -
Analysis of the CD33-related siglec family reveals that Siglec-9 is an endocytic receptor expressed on subsets of acute myeloid leukemia cells and absent from normal hematopoietic progenitors
B Biedermann, D Gil, D Bowen and P Crocker
Original research paper: Leukemia Research 31
doi:10.1016/j.leukres.2006.05.026 -
Targeted identification of a unique glycan epitope of Schistosoma mansoni egg antigens using a diagnostic antibody
M Robijn et al.
Original research paper: Molecular and Biochemical Parasitology 151
doi:10.1016/j.molbiopara.2006.10.019 -
Structure of the glycosylphosphatidylinositol anchor of the Trypanosoma brucei transferrin receptor
A Mehlert and M Ferguson
Original research paper: Molecular and Biochemical Parasitology 151
doi:10.1016/j.molbiopara.2006.11.001 -
Molecular cloning and characterization of a C-type lectin from Ancylostoma ceylanicum: Evidence for a role in hookworm reproductive physiology
A Brown et al.
Original research paper: Molecular and Biochemical Parasitology 151
doi:10.1016/j.molbiopara.2006.10.017 -
Structural and Mechanistic Features of Protein O Glycosylation Linked to CD8+ T-Cell Apoptosis
S. J. Van dyken, R. S. Green and J. D. Marth
Original research paper: Molecular and Cellular Biology 27
doi:10.1128/MCB.01750-06 -
Implications for Molecular Mechanisms of Glycoprotein Hormone Receptors Using a New Sequence-Structure-Function Analysis Resource
G. Kleinau et al.
Original research paper: Molecular Endocrinology 21
doi:10.1210/me.2006-0309 -
Cloning and characterization of a novel C-type lectin from Zhikong scallop Chlamys farreri
H Wang et al.
Original research paper: Molecular Immunology 44
doi:10.1016/j.molimm.2006.04.015 -
Gangliosides, Ab1 and Ab2 antibodies II. Light versus heavy chain: An idiotype-anti-idiotype case study
A Lopezrequena et al.
Original research paper: Molecular Immunology 44
doi:10.1016/j.molimm.2006.03.004 -
Alteration of matrix glycosaminoglycans diminishes articular chondrocytes' response to a canonical Wnt signal1
S Shortkroff and K Yates
Original research paper: Osteoarthritis and Cartilage 15
doi:10.1016/j.joca.2006.07.004 -
BIG1, a brefeldin A-inhibited guanine nucleotide-exchange protein, is required for correct glycosylation and function of integrin β1
X. Shen, M.-S. Hong, J. Moss and M. Vaughan
Original research paper: Proceedings of the National Academy of Sciences 104
doi:10.1073/pnas.0610535104 -
Epidermal growth factor receptor tyrosine kinase is modulated by GM3 interaction with N-linked GlcNAc termini of the receptor
S.-J. Yoon et al.
Original research paper: Proceedings of the National Academy of Sciences 103
doi:10.1073/pnas.0609281103 -
The location and characterisation of the O-linked glycans of the human insulin receptor
Lindsay G. Sparrow et al.
Original research paper: Proteins: Structure, Function, and Bioinformatics 66
doi:10.1002/prot.21261 -
The Expression of NG2 Proteoglycan in the Human Intervertebral Disc
Koji Akeda et al.
Original research paper: Spine 32
doi:10.1097/01.brs.0000254108.08507.04 -
Lectin-affinity chromatography for downstream processing of MDCK cell culture derived human influenza A viruses
L Opitz et al.
Original research paper: Vaccine 25
doi:10.1016/j.vaccine.2006.08.043 -
Characterization of Marburg virus glycoprotein in viral entry
B Manicassamy et al.
Original research paper: Virology 358
doi:10.1016/j.virol.2006.06.041
-
